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Functional and structural insights into a novel insect G protein-coupled receptor, allatostatin receptor type C of pine processionary moth

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dc.contributor Ph.D. Program in Molecular Biology and Genetics.
dc.contributor.advisor İyison, Necla Birgül.
dc.contributor.author Shahraki, Aida.
dc.date.accessioned 2023-03-16T11:28:18Z
dc.date.available 2023-03-16T11:28:18Z
dc.date.issued 2020.
dc.identifier.other BIO 2020 S43 PhD
dc.identifier.uri http://digitalarchive.boun.edu.tr/handle/123456789/15521
dc.description.abstract Insect neuropeptides regulate di erent aspects of insect physiology. They exert their function via binding to their cognate receptor belonging to Class A G protein coupled receptors (GPCRs). Neuropeptide receptors are potential targets for nextgeneration pesticides. Allatostatin (AST) neuropeptides regulate the development of insects through the inhibition of juvenile hormone (JH) secretion. Here, Allatostatin receptor type C (AstR-C) of pine processionary moth, a pest in Mediterranean countries, was extracted from the whole genome sequencing (WGS) data. The receptor was cloned and characterized combining via di erent approaches. Using resonance energy transfer (RET)-based techniques, kinetics of G protein coupling and -arrestin recruitment were investigated. Homology modeling, docking and molecular dynamics (MD) simulation approaches were conducted to predict the orthosteric pocket of the receptor which was validated by in silico and in vitro methods. The binding pocket was subjected to virtual screening studies to nd agonists. As a result, it was found that binding of the native ligand at sab-nanomolar and nanomolar ranges to the receptor induces Gi/o protein coupling and -arrestin recruitment, respectively. Kinetics studies revealed that a brief stimulation of the receptor at nanomolar range is enough to obtain a long-lasting response. The accuracy of the predicted orthosteric pocket was validated via G protein activation assay. Q2716:55 (Ballesteros-Weinstein numbering) was found to be critical for G protein-dependent activation of AstR-C. Virtual screening studies resulted in obtaining a small molecule capable of activating the receptor.
dc.format.extent 30 cm.
dc.publisher Thesis (Ph.D.) - Bogazici University. Institute for Graduate Studies in Science and Engineering, 2020.
dc.subject.lcsh G proteins.
dc.title Functional and structural insights into a novel insect G protein-coupled receptor, allatostatin receptor type C of pine processionary moth
dc.format.pages xxii, 142 leaves ;


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